ITS2_Box1_PCR1_5

PCR 1 amplifying ITS2 marker for Box 1 - O.Fav deep

Protocol

Samples:

  • OFAV = Orbicella faveolata
  • OFRA = Orbicella franksi
  • S = Shallow
  • P = Deep
Species Treatment ID
OFAV P 369
OFAV P 371
OFAV P OHS3
OFAV P OHS4
OFAV P 352

Master Mix:

Component Volume for 1 rxn Volume for 5 rxn (+10% error) in triplicate
2x MyTaq Mix 12.5 uL 247.50 uL
Molecular Water 9.5 uL 188.10 uL
ITS2 Primer Forward (10 uM) 1.0 uL 19.8 uL
ITS2 Primer Reverse (10 uM) 1.0 uL 19.8 uL

Strip Tube Set Up:

Strip (replicate) Number A B C D E F
1 369 371 OHS3 OHS4 2HS12 352
2 369 371 OHS3 OHS4 2HS12 352
3 369 371 OHS3 OHS4 2HS12 352

Gel Map:

No Gel photo – all samples failed

Written on April 9, 2022